Protein–RNA interactions for Protein: B4DS77

SHISA9, Protein shisa-9, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9B4DS77 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA9B4DS77 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SHISA9B4DS77 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA9B4DS77 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA9B4DS77 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA9B4DS77 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA9B4DS77 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SHISA9B4DS77 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
SHISA9B4DS77 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA9B4DS77 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.54■□□□□ 0.88
SHISA9B4DS77 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.54■□□□□ 0.88
SHISA9B4DS77 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA9B4DS77 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA9B4DS77 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHISA9B4DS77 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 KRT18P24-201ENST00000344739 1156 ntBASIC20.53■□□□□ 0.88
SHISA9B4DS77 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 AC239859.2-201ENST00000444165 318 ntBASIC20.53■□□□□ 0.88
SHISA9B4DS77 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHISA9B4DS77 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.53■□□□□ 0.88
SHISA9B4DS77 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.53■□□□□ 0.88
SHISA9B4DS77 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHISA9B4DS77 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.52■□□□□ 0.88
SHISA9B4DS77 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHISA9B4DS77 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHISA9B4DS77 Z92544.1-202ENST00000571933 1220 ntBASIC20.52■□□□□ 0.88
SHISA9B4DS77 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.52■□□□□ 0.88
SHISA9B4DS77 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SHISA9B4DS77 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHISA9B4DS77 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
SHISA9B4DS77 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHISA9B4DS77 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
SHISA9B4DS77 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.51■□□□□ 0.87
SHISA9B4DS77 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.51■□□□□ 0.87
SHISA9B4DS77 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.51■□□□□ 0.87
SHISA9B4DS77 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SHISA9B4DS77 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHISA9B4DS77 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHISA9B4DS77 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.5■□□□□ 0.87
SHISA9B4DS77 THA1P-201ENST00000590384 1145 ntBASIC20.5■□□□□ 0.87
SHISA9B4DS77 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SHISA9B4DS77 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHISA9B4DS77 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHISA9B4DS77 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.49■□□□□ 0.87
SHISA9B4DS77 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SHISA9B4DS77 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SHISA9B4DS77 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHISA9B4DS77 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHISA9B4DS77 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHISA9B4DS77 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHISA9B4DS77 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 AL592295.1-201ENST00000400984 884 ntBASIC20.48■□□□□ 0.87
SHISA9B4DS77 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 AC120024.1-201ENST00000562672 995 ntBASIC20.48■□□□□ 0.87
SHISA9B4DS77 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHISA9B4DS77 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.48■□□□□ 0.87
SHISA9B4DS77 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHISA9B4DS77 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SHISA9B4DS77 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHISA9B4DS77 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.47■□□□□ 0.87
SHISA9B4DS77 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SHISA9B4DS77 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHISA9B4DS77 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SHISA9B4DS77 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHISA9B4DS77 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SHISA9B4DS77 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHISA9B4DS77 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHISA9B4DS77 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SHISA9B4DS77 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.46■□□□□ 0.87
SHISA9B4DS77 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHISA9B4DS77 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SHISA9B4DS77 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SHISA9B4DS77 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHISA9B4DS77 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SHISA9B4DS77 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHISA9B4DS77 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHISA9B4DS77 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHISA9B4DS77 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SHISA9B4DS77 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA9B4DS77 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHISA9B4DS77 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA9B4DS77 BX664725.1-201ENST00000438252 379 ntBASIC20.44■□□□□ 0.86
SHISA9B4DS77 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHISA9B4DS77 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
SHISA9B4DS77 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHISA9B4DS77 AL356441.2-201ENST00000443009 864 ntBASIC20.43■□□□□ 0.86
SHISA9B4DS77 KRT125P-201ENST00000546827 989 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms