Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
RNF103-CHMP3A0A140T963 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
RNF103-CHMP3A0A140T963 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF103-CHMP3A0A140T963 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RNF103-CHMP3A0A140T963 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RNF103-CHMP3A0A140T963 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RNF103-CHMP3A0A140T963 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 MIR7108-201ENST00000614319 87 ntBASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
RNF103-CHMP3A0A140T963 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 AL139125.2-201ENST00000623134 1869 ntBASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RNF103-CHMP3A0A140T963 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
RNF103-CHMP3A0A140T963 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 AC022211.4-201ENST00000625094 2161 ntBASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RNF103-CHMP3A0A140T963 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.73■■□□□ 1.23
RNF103-CHMP3A0A140T963 AC138932.3-201ENST00000567634 1902 ntBASIC22.73■■□□□ 1.23
RNF103-CHMP3A0A140T963 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF103-CHMP3A0A140T963 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF103-CHMP3A0A140T963 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RNF103-CHMP3A0A140T963 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF103-CHMP3A0A140T963 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 AC133561.1-201ENST00000568600 2415 ntBASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RNF103-CHMP3A0A140T963 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF103-CHMP3A0A140T963 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RNF103-CHMP3A0A140T963 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RNF103-CHMP3A0A140T963 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF103-CHMP3A0A140T963 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF103-CHMP3A0A140T963 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 AC096887.2-201ENST00000623443 1957 ntBASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF103-CHMP3A0A140T963 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RNF103-CHMP3A0A140T963 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF103-CHMP3A0A140T963 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF103-CHMP3A0A140T963 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
RNF103-CHMP3A0A140T963 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
RNF103-CHMP3A0A140T963 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RNF103-CHMP3A0A140T963 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF103-CHMP3A0A140T963 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF103-CHMP3A0A140T963 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms