Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 ERN1-208ENST00000606895 2068 ntBASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 AC145676.1-201ENST00000514988 2004 ntBASIC20.09■□□□□ 0.81
TRAV38-1A0A0B4J264 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV38-1A0A0B4J264 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV38-1A0A0B4J264 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.08■□□□□ 0.8
TRAV38-1A0A0B4J264 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV38-1A0A0B4J264 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 DUX4L18-201ENST00000553347 1267 ntBASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRAV38-1A0A0B4J264 DUSP8P4-201ENST00000399538 1761 ntBASIC20.06■□□□□ 0.8
TRAV38-1A0A0B4J264 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV38-1A0A0B4J264 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV38-1A0A0B4J264 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 AC139795.1-202ENST00000500444 432 ntBASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 AL033527.3-201ENST00000566366 1196 ntBASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV38-1A0A0B4J264 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV38-1A0A0B4J264 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV38-1A0A0B4J264 RPS2P7-201ENST00000447334 885 ntBASIC20.03■□□□□ 0.8
TRAV38-1A0A0B4J264 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV38-1A0A0B4J264 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRAV38-1A0A0B4J264 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 BHLHE23-202ENST00000612929 1109 ntBASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAV38-1A0A0B4J264 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 AC087393.1-201ENST00000582896 145 ntBASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 AC096887.2-201ENST00000623443 1957 ntBASIC20.01■□□□□ 0.79
TRAV38-1A0A0B4J264 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 AC074183.2-201ENST00000623112 922 ntBASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20■□□□□ 0.79
TRAV38-1A0A0B4J264 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
TRAV38-1A0A0B4J264 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms