Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV2A0A0B4J234 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV2A0A0B4J234 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV2A0A0B4J234 ERN1-208ENST00000606895 2068 ntBASIC17.97■□□□□ 0.47
TRAV2A0A0B4J234 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV2A0A0B4J234 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV2A0A0B4J234 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV2A0A0B4J234 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV2A0A0B4J234 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 AL592293.1-201ENST00000502889 1188 ntBASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.96■□□□□ 0.47
TRAV2A0A0B4J234 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV2A0A0B4J234 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 NTF6A-201ENST00000591175 560 ntBASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 AC018755.3-202ENST00000596210 929 ntBASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 U85056.1-201ENST00000616429 682 ntBASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 AC096887.2-201ENST00000623443 1957 ntBASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAV2A0A0B4J234 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV2A0A0B4J234 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV2A0A0B4J234 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV2A0A0B4J234 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV2A0A0B4J234 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV2A0A0B4J234 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV2A0A0B4J234 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV2A0A0B4J234 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 AC097639.1-201ENST00000565519 1891 ntBASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV2A0A0B4J234 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV2A0A0B4J234 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV2A0A0B4J234 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV2A0A0B4J234 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV2A0A0B4J234 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV2A0A0B4J234 MIR6765-201ENST00000614092 87 ntBASIC17.9■□□□□ 0.46
TRAV2A0A0B4J234 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV2A0A0B4J234 KRT18P60-201ENST00000312876 1297 ntBASIC17.89■□□□□ 0.45
TRAV2A0A0B4J234 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV2A0A0B4J234 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV2A0A0B4J234 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV2A0A0B4J234 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV2A0A0B4J234 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 AC129492.7-201ENST00000622992 756 ntBASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV2A0A0B4J234 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV2A0A0B4J234 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 DUX4L9-201ENST00000449051 1259 ntBASIC17.86■□□□□ 0.45
TRAV2A0A0B4J234 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms