Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRAV19A0A0A6YYK7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.9■■□□□ 1.58
TRAV19A0A0A6YYK7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRAV19A0A0A6YYK7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.89■■□□□ 1.58
TRAV19A0A0A6YYK7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRAV19A0A0A6YYK7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
TRAV19A0A0A6YYK7 AC239859.2-201ENST00000444165 318 ntBASIC24.89■■□□□ 1.58
TRAV19A0A0A6YYK7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.89■■□□□ 1.58
TRAV19A0A0A6YYK7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRAV19A0A0A6YYK7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 Z92544.1-202ENST00000571933 1220 ntBASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRAV19A0A0A6YYK7 KRT18P24-201ENST00000344739 1156 ntBASIC24.87■■□□□ 1.57
TRAV19A0A0A6YYK7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.87■■□□□ 1.57
TRAV19A0A0A6YYK7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRAV19A0A0A6YYK7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRAV19A0A0A6YYK7 THA1P-201ENST00000590384 1145 ntBASIC24.86■■□□□ 1.57
TRAV19A0A0A6YYK7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRAV19A0A0A6YYK7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.85■■□□□ 1.57
TRAV19A0A0A6YYK7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TRAV19A0A0A6YYK7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.85■■□□□ 1.57
TRAV19A0A0A6YYK7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.84■■□□□ 1.57
TRAV19A0A0A6YYK7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 AL592295.1-201ENST00000400984 884 ntBASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.83■■□□□ 1.57
TRAV19A0A0A6YYK7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 BX664725.1-201ENST00000438252 379 ntBASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 AC120024.1-201ENST00000562672 995 ntBASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.82■■□□□ 1.56
TRAV19A0A0A6YYK7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRAV19A0A0A6YYK7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRAV19A0A0A6YYK7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TRAV19A0A0A6YYK7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.81■■□□□ 1.56
TRAV19A0A0A6YYK7 KRT125P-201ENST00000546827 989 ntBASIC24.81■■□□□ 1.56
TRAV19A0A0A6YYK7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAV19A0A0A6YYK7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 AC131212.1-201ENST00000613771 668 ntBASIC24.79■■□□□ 1.56
TRAV19A0A0A6YYK7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV19A0A0A6YYK7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV19A0A0A6YYK7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV19A0A0A6YYK7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAV19A0A0A6YYK7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.78■■□□□ 1.56
TRAV19A0A0A6YYK7 AL356441.2-201ENST00000443009 864 ntBASIC24.77■■□□□ 1.56
TRAV19A0A0A6YYK7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
TRAV19A0A0A6YYK7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRAV19A0A0A6YYK7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
TRAV19A0A0A6YYK7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.76■■□□□ 1.55
TRAV19A0A0A6YYK7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 MIR4787-201ENST00000607364 84 ntBASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TRAV19A0A0A6YYK7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TRAV19A0A0A6YYK7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.73■■□□□ 1.55
TRAV19A0A0A6YYK7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms