Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV23-1A0A0A0MS06 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV23-1A0A0A0MS06 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV23-1A0A0A0MS06 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRBV23-1A0A0A0MS06 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV23-1A0A0A0MS06 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV23-1A0A0A0MS06 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV23-1A0A0A0MS06 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV23-1A0A0A0MS06 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV23-1A0A0A0MS06 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 AL592293.1-201ENST00000502889 1188 ntBASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV23-1A0A0A0MS06 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 KRT18P10-201ENST00000388836 1287 ntBASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV23-1A0A0A0MS06 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV23-1A0A0A0MS06 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV23-1A0A0A0MS06 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 AC092803.2-201ENST00000564287 1899 ntBASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 AC093323.1-202ENST00000635031 2045 ntBASIC19.92■□□□□ 0.78
TRBV23-1A0A0A0MS06 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 KRT18P60-201ENST00000312876 1297 ntBASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV23-1A0A0A0MS06 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV23-1A0A0A0MS06 AC018755.3-202ENST00000596210 929 ntBASIC19.9■□□□□ 0.78
TRBV23-1A0A0A0MS06 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.9■□□□□ 0.78
TRBV23-1A0A0A0MS06 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV23-1A0A0A0MS06 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV23-1A0A0A0MS06 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV23-1A0A0A0MS06 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV23-1A0A0A0MS06 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 AC129492.7-201ENST00000622992 756 ntBASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.88■□□□□ 0.77
TRBV23-1A0A0A0MS06 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
TRBV23-1A0A0A0MS06 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV23-1A0A0A0MS06 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.87■□□□□ 0.77
TRBV23-1A0A0A0MS06 AC010501.1-201ENST00000606270 1962 ntBASIC19.86■□□□□ 0.77
TRBV23-1A0A0A0MS06 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms