Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC187A0A096LP49 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC187A0A096LP49 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.87■■□□□ 1.25
CCDC187A0A096LP49 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.87■■□□□ 1.25
CCDC187A0A096LP49 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC187A0A096LP49 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC187A0A096LP49 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC187A0A096LP49 AC142472.1-201ENST00000612013 1741 ntBASIC22.86■■□□□ 1.25
CCDC187A0A096LP49 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CCDC187A0A096LP49 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.86■■□□□ 1.25
CCDC187A0A096LP49 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC187A0A096LP49 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC187A0A096LP49 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC187A0A096LP49 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC187A0A096LP49 MIR935-201ENST00000401179 91 ntBASIC22.85■■□□□ 1.25
CCDC187A0A096LP49 AC092028.1-203ENST00000608262 953 ntBASIC22.85■■□□□ 1.25
CCDC187A0A096LP49 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CCDC187A0A096LP49 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC187A0A096LP49 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC187A0A096LP49 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC187A0A096LP49 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC187A0A096LP49 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC187A0A096LP49 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC187A0A096LP49 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC187A0A096LP49 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CCDC187A0A096LP49 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 MIR4281-201ENST00000580852 62 ntBASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC187A0A096LP49 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.81■■□□□ 1.24
CCDC187A0A096LP49 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC187A0A096LP49 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC187A0A096LP49 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.79■■□□□ 1.24
CCDC187A0A096LP49 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC187A0A096LP49 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC187A0A096LP49 MIR638-201ENST00000385237 100 ntBASIC22.78■■□□□ 1.24
CCDC187A0A096LP49 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.78■■□□□ 1.24
CCDC187A0A096LP49 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC187A0A096LP49 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC187A0A096LP49 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 AC131281.2-201ENST00000520478 145 ntBASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 AL139246.5-201ENST00000606645 996 ntBASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CCDC187A0A096LP49 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC187A0A096LP49 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 AC010997.5-201ENST00000609182 354 ntBASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC187A0A096LP49 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 AC011551.1-201ENST00000614101 683 ntBASIC22.73■■□□□ 1.23
CCDC187A0A096LP49 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 MTDHP2-201ENST00000601468 714 ntBASIC22.72■■□□□ 1.23
CCDC187A0A096LP49 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms