Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV18A0A075B6X5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV18A0A075B6X5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV18A0A075B6X5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV18A0A075B6X5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV18A0A075B6X5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV18A0A075B6X5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 AC097639.1-201ENST00000565519 1891 ntBASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV18A0A075B6X5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 AC021231.2-201ENST00000594613 730 ntBASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV18A0A075B6X5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV18A0A075B6X5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRAV18A0A075B6X5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 AC044849.2-201ENST00000606596 710 ntBASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV18A0A075B6X5 LINC00543-201ENST00000567234 1845 ntBASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRAV18A0A075B6X5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 SLC6A10P-202ENST00000431994 2058 ntBASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 AC068473.5-201ENST00000616428 2072 ntBASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV18A0A075B6X5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRAV18A0A075B6X5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRAV18A0A075B6X5 AL359504.2-201ENST00000605506 1601 ntBASIC20.35■□□□□ 0.85
TRAV18A0A075B6X5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV18A0A075B6X5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAV18A0A075B6X5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV18A0A075B6X5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRAV18A0A075B6X5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV18A0A075B6X5 DUX4L29-201ENST00000425409 679 ntBASIC20.33■□□□□ 0.85
TRAV18A0A075B6X5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAV18A0A075B6X5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV18A0A075B6X5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms