Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 AL158211.3-201ENST00000607385 239 ntBASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 AC016027.1-202ENST00000607927 1699 ntBASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CSNK1G3Q9Y6M4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 AC138761.1-201ENST00000584393 385 ntBASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1G3Q9Y6M4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 KRT18P34-201ENST00000488218 1270 ntBASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 AC124947.2-201ENST00000547118 1133 ntBASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 MIR6080-201ENST00000617359 66 ntBASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1G3Q9Y6M4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms