Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.34■□□□□ 0.21
RNF11Q9Y3C5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.33■□□□□ 0.21
RNF11Q9Y3C5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 AC092364.2-201ENST00000596710 2692 ntBASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 TOP3BP1-201ENST00000420768 1380 ntBASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF11Q9Y3C5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 LAGE3P1-201ENST00000425356 484 ntBASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 AC087163.2-201ENST00000457299 853 ntBASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 AC013467.2-201ENST00000605472 835 ntBASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 AC002310.6-201ENST00000624451 1377 ntBASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 AC107918.4-202ENST00000641623 219 ntBASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RNF11Q9Y3C5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RNF11Q9Y3C5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms