Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20■□□□□ 0.79
SALL1Q9NSC2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20■□□□□ 0.79
SALL1Q9NSC2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20■□□□□ 0.79
SALL1Q9NSC2 HLA-H-201ENST00000383620 1096 ntBASIC20■□□□□ 0.79
SALL1Q9NSC2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20■□□□□ 0.79
SALL1Q9NSC2 AC092580.3-201ENST00000430932 139 ntBASIC20■□□□□ 0.79
SALL1Q9NSC2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20■□□□□ 0.79
SALL1Q9NSC2 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20■□□□□ 0.79
SALL1Q9NSC2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20■□□□□ 0.79
SALL1Q9NSC2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20■□□□□ 0.79
SALL1Q9NSC2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20■□□□□ 0.79
SALL1Q9NSC2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SALL1Q9NSC2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.99■□□□□ 0.79
SALL1Q9NSC2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 AC097493.3-201ENST00000509725 367 ntBASIC19.99■□□□□ 0.79
SALL1Q9NSC2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.99■□□□□ 0.79
SALL1Q9NSC2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 AL512652.2-201ENST00000625156 1716 ntBASIC19.98■□□□□ 0.79
SALL1Q9NSC2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SALL1Q9NSC2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.97■□□□□ 0.79
SALL1Q9NSC2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms