Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AC002310.6-201ENST00000624451 1377 ntBASIC16.32■□□□□ 0.2
EBF4Q9BQW3 AC133561.5-201ENST00000635547 218 ntBASIC16.32■□□□□ 0.2
EBF4Q9BQW3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EBF4Q9BQW3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 INTS4P1-201ENST00000438455 1935 ntBASIC16.31■□□□□ 0.2
EBF4Q9BQW3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 LINC00982-205ENST00000420957 435 ntBASIC16.31■□□□□ 0.2
EBF4Q9BQW3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EBF4Q9BQW3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 CDC14C-201ENST00000428251 1719 ntBASIC16.3■□□□□ 0.2
EBF4Q9BQW3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EBF4Q9BQW3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 AC112504.1-201ENST00000623415 1841 ntBASIC16.29■□□□□ 0.2
EBF4Q9BQW3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EBF4Q9BQW3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms