Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AL023973.1-201ENST00000624619 620 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PPT1-215ENST00000641471 2368 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AL122018.1-201ENST00000446607 2310 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AL512652.2-201ENST00000625156 1716 ntBASIC14.41□□□□□ -0.1
CMTM3Q96MX0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AL355075.4-201ENST00000554988 638 ntBASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SNX33P1-201ENST00000592116 1762 ntBASIC14.41□□□□□ -0.1
CMTM3Q96MX0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 KRT8P39-201ENST00000396270 1433 ntBASIC14.41□□□□□ -0.1
CMTM3Q96MX0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CMTM3Q96MX0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 AL031731.1-201ENST00000642131 2094 ntBASIC14.4□□□□□ -0.1
CMTM3Q96MX0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 AL671710.1-201ENST00000610245 2349 ntBASIC14.4□□□□□ -0.1
CMTM3Q96MX0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMTM3Q96MX0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms