Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 KRT43P-201ENST00000434019 910 ntBASIC19.3■□□□□ 0.68
CDCA5Q96FF9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 AL583810.1-201ENST00000553344 1045 ntBASIC19.3■□□□□ 0.68
CDCA5Q96FF9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDCA5Q96FF9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 AC004408.2-201ENST00000623613 2777 ntBASIC19.29■□□□□ 0.68
CDCA5Q96FF9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 AC018665.1-201ENST00000622927 1362 ntBASIC19.29■□□□□ 0.68
CDCA5Q96FF9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.29■□□□□ 0.68
CDCA5Q96FF9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 BCYRN1-201ENST00000418539 200 ntBASIC19.28■□□□□ 0.68
CDCA5Q96FF9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 AC068587.10-201ENST00000641210 219 ntBASIC19.28■□□□□ 0.68
CDCA5Q96FF9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDCA5Q96FF9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 AC093525.8-201ENST00000624099 1342 ntBASIC19.27■□□□□ 0.68
CDCA5Q96FF9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDCA5Q96FF9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms