Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 DUSP5P1-201ENST00000441325 1139 ntBASIC17.68■□□□□ 0.42
TRIM11Q96F44 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM11Q96F44 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM11Q96F44 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.67■□□□□ 0.42
TRIM11Q96F44 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.67■□□□□ 0.42
TRIM11Q96F44 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM11Q96F44 AL391005.1-201ENST00000623953 2435 ntBASIC17.67■□□□□ 0.42
TRIM11Q96F44 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM11Q96F44 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 GPAA1P2-202ENST00000606848 1787 ntBASIC17.66■□□□□ 0.42
TRIM11Q96F44 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms