Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
APH1AQ96BI3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
APH1AQ96BI3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 AL645728.1-201ENST00000366221 2101 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 ALG1L5P-201ENST00000482043 771 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 AC112482.1-201ENST00000492080 688 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 MIR3909-201ENST00000579518 119 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 AL009183.1-201ENST00000603760 355 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 AC021097.1-201ENST00000607902 574 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 AL161645.1-201ENST00000622716 1255 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 AL139011.1-202ENST00000642063 584 ntBASIC14.8□□□□□ -0.04
APH1AQ96BI3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APH1AQ96BI3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.8□□□□□ -0.04
APH1AQ96BI3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 AC109635.5-201ENST00000533593 962 ntBASIC14.79□□□□□ -0.04
APH1AQ96BI3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APH1AQ96BI3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APH1AQ96BI3 AC080080.1-201ENST00000625121 2420 ntBASIC14.78□□□□□ -0.04
APH1AQ96BI3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APH1AQ96BI3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APH1AQ96BI3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms