Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 HCG4B-203ENST00000450128 991 ntBASIC16.96■□□□□ 0.31
PTCD2Q8WV60 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 MIR4492-201ENST00000581627 80 ntBASIC16.96■□□□□ 0.31
PTCD2Q8WV60 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 PCDHB19P-201ENST00000570871 2371 ntBASIC16.96■□□□□ 0.31
PTCD2Q8WV60 AC018695.7-201ENST00000624587 2492 ntBASIC16.96■□□□□ 0.31
PTCD2Q8WV60 AC092171.3-201ENST00000610122 2651 ntBASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCD2Q8WV60 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTCD2Q8WV60 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 VN2R19P-201ENST00000442399 1052 ntBASIC16.95■□□□□ 0.3
PTCD2Q8WV60 AL591424.1-201ENST00000442569 1213 ntBASIC16.95■□□□□ 0.3
PTCD2Q8WV60 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 AC092865.5-201ENST00000545435 363 ntBASIC16.95■□□□□ 0.3
PTCD2Q8WV60 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCD2Q8WV60 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCD2Q8WV60 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms