Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 AC022616.7-201ENST00000525383 220 ntBASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 RNF126P1-202ENST00000569893 925 ntBASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 LINC02228-204ENST00000642115 2962 ntBASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 AC132938.5-201ENST00000624980 1813 ntBASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFWD2Q8NHY2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.58■□□□□ 0.25
RFWD2Q8NHY2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RFWD2Q8NHY2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 Z83836.1-201ENST00000624605 1642 ntBASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 AC063952.2-201ENST00000498792 1227 ntBASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 AL049597.2-201ENST00000565575 961 ntBASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 LINC01238-205ENST00000567549 1107 ntBASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 AL138831.2-201ENST00000606564 490 ntBASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 AP002414.2-201ENST00000591780 3365 ntBASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFWD2Q8NHY2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms