Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL596087.1-201ENST00000400979 1969 ntBASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC01561Q8N1V8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 GGT4P-201ENST00000623672 1708 ntBASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RCN1P2-201ENST00000398357 915 ntBASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 AC091607.1-201ENST00000490318 1060 ntBASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 LINC01023-201ENST00000606054 436 ntBASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 KRT18P1-202ENST00000452408 1331 ntBASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 NCF1C-201ENST00000438382 1427 ntBASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01561Q8N1V8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 NSUN5P1-202ENST00000421140 1535 ntBASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 NSUN5P2-203ENST00000457352 1529 ntBASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC01561Q8N1V8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms