Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.42■□□□□ 0.38
RFX6Q8HWS3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 DUSP5P1-201ENST00000441325 1139 ntBASIC17.41■□□□□ 0.38
RFX6Q8HWS3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 AL121912.1-201ENST00000603683 238 ntBASIC17.41■□□□□ 0.38
RFX6Q8HWS3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 GGTLC5P-201ENST00000617623 998 ntBASIC17.41■□□□□ 0.38
RFX6Q8HWS3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 AC005052.1-201ENST00000625181 2492 ntBASIC17.41■□□□□ 0.38
RFX6Q8HWS3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFX6Q8HWS3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 SNX33P1-201ENST00000592116 1762 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 AL671710.1-201ENST00000610245 2349 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 PMS2P1-201ENST00000431037 1228 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 MIR4492-201ENST00000581627 80 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 AC008735.5-201ENST00000623544 497 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 AC131009.4-201ENST00000624048 1740 ntBASIC17.4■□□□□ 0.38
RFX6Q8HWS3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX6Q8HWS3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RFX6Q8HWS3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RFX6Q8HWS3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
RFX6Q8HWS3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RFX6Q8HWS3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX6Q8HWS3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms