Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SNX33P1-201ENST00000592116 1762 ntBASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD3Q7Z3D4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 PDPK2P-202ENST00000562415 1191 ntBASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 AL031432.2-201ENST00000566714 459 ntBASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 AL928711.1-201ENST00000570165 459 ntBASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD3Q7Z3D4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 AL513477.1-201ENST00000602865 2407 ntBASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 BX842568.4-201ENST00000421222 227 ntBASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 AC092171.3-201ENST00000610122 2651 ntBASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD3Q7Z3D4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD3Q7Z3D4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms