Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AL020989.1-201ENST00000422979 469 ntBASIC15.17■□□□□ 0.02
SHFQ7M4L6 ACTG1P4-201ENST00000425123 1122 ntBASIC15.17■□□□□ 0.02
SHFQ7M4L6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 KRT17P6-201ENST00000453795 1220 ntBASIC15.17■□□□□ 0.02
SHFQ7M4L6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 DUX4L17-201ENST00000557360 1267 ntBASIC15.17■□□□□ 0.02
SHFQ7M4L6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AC148477.5-201ENST00000625164 1645 ntBASIC15.17■□□□□ 0.02
SHFQ7M4L6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 AC144831.1-201ENST00000573312 2656 ntBASIC15.17■□□□□ 0.02
SHFQ7M4L6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SHFQ7M4L6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHFQ7M4L6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 PMPCAP1-201ENST00000508114 1576 ntBASIC15.16■□□□□ 0.02
SHFQ7M4L6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 POM121L3P-201ENST00000419331 1163 ntBASIC15.16■□□□□ 0.02
SHFQ7M4L6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 NUS1P1-201ENST00000446295 882 ntBASIC15.16■□□□□ 0.02
SHFQ7M4L6 AC096582.2-201ENST00000510860 516 ntBASIC15.16■□□□□ 0.02
SHFQ7M4L6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.16■□□□□ 0.02
SHFQ7M4L6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHFQ7M4L6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms