Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.19
LYSMD4Q5XG99 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 MIR1909-201ENST00000411312 80 ntBASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AC055876.2-201ENST00000531834 546 ntBASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AC124947.2-201ENST00000547118 1133 ntBASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AC013467.2-201ENST00000605472 835 ntBASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 AL671710.1-201ENST00000610245 2349 ntBASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LYSMD4Q5XG99 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AC022494.1-201ENST00000466044 728 ntBASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 RAB43P1-201ENST00000561790 589 ntBASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AC024267.1-201ENST00000582320 895 ntBASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AL023806.1-201ENST00000603994 1649 ntBASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LYSMD4Q5XG99 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 RPS2P32-201ENST00000439199 892 ntBASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 KRT17P8-201ENST00000540749 863 ntBASIC16.24■□□□□ 0.19
LYSMD4Q5XG99 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms