Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATPAF1Q5TC12 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 KLF4P1-201ENST00000412782 1185 ntBASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 SPDYE21P-201ENST00000413323 827 ntBASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATPAF1Q5TC12 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 AC068418.2-201ENST00000577309 3703 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 AKR1C7P-201ENST00000305623 895 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 SIGLEC30P-201ENST00000455569 941 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 AC124947.2-201ENST00000547118 1133 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 MTDHP3-201ENST00000594186 672 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 AL139288.1-201ENST00000623748 933 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.57□□□□□ -0.08
ATPAF1Q5TC12 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATPAF1Q5TC12 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms