Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.14■□□□□ 0.65
USH1GQ495M9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.14■□□□□ 0.65
USH1GQ495M9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.14■□□□□ 0.65
USH1GQ495M9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.14■□□□□ 0.65
USH1GQ495M9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.14■□□□□ 0.65
USH1GQ495M9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.14■□□□□ 0.65
USH1GQ495M9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
USH1GQ495M9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.14■□□□□ 0.65
USH1GQ495M9 AC093512.1-201ENST00000617969 520 ntBASIC19.14■□□□□ 0.65
USH1GQ495M9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 AC008267.7-201ENST00000624570 1194 ntBASIC19.14■□□□□ 0.65
USH1GQ495M9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
USH1GQ495M9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.14■□□□□ 0.65
USH1GQ495M9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USH1GQ495M9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USH1GQ495M9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.14■□□□□ 0.65
USH1GQ495M9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USH1GQ495M9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USH1GQ495M9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 KRT18P34-201ENST00000488218 1270 ntBASIC19.13■□□□□ 0.65
USH1GQ495M9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.13■□□□□ 0.65
USH1GQ495M9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USH1GQ495M9 KRT8P23-201ENST00000560090 1207 ntBASIC19.13■□□□□ 0.65
USH1GQ495M9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USH1GQ495M9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
USH1GQ495M9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USH1GQ495M9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.13■□□□□ 0.65
USH1GQ495M9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USH1GQ495M9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USH1GQ495M9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USH1GQ495M9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
USH1GQ495M9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USH1GQ495M9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
USH1GQ495M9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
USH1GQ495M9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.12■□□□□ 0.65
USH1GQ495M9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USH1GQ495M9 KRT8P39-201ENST00000396270 1433 ntBASIC19.12■□□□□ 0.65
USH1GQ495M9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.12■□□□□ 0.65
USH1GQ495M9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
USH1GQ495M9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.12■□□□□ 0.65
USH1GQ495M9 AP000842.3-202ENST00000569238 1080 ntBASIC19.12■□□□□ 0.65
USH1GQ495M9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USH1GQ495M9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USH1GQ495M9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USH1GQ495M9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USH1GQ495M9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.11■□□□□ 0.65
USH1GQ495M9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 AC105020.1-201ENST00000435356 2205 ntBASIC19.11■□□□□ 0.65
USH1GQ495M9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.11■□□□□ 0.65
USH1GQ495M9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.11■□□□□ 0.65
USH1GQ495M9 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.11■□□□□ 0.65
USH1GQ495M9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USH1GQ495M9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms