Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.78□□□□□ -0.04
SOX2P48431 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.78□□□□□ -0.04
SOX2P48431 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.78□□□□□ -0.04
SOX2P48431 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 DUX4L17-201ENST00000557360 1267 ntBASIC14.78□□□□□ -0.04
SOX2P48431 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.78□□□□□ -0.04
SOX2P48431 LINC01238-205ENST00000567549 1107 ntBASIC14.78□□□□□ -0.04
SOX2P48431 NTF6B-201ENST00000591913 560 ntBASIC14.78□□□□□ -0.04
SOX2P48431 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SOX2P48431 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 AC097637.2-201ENST00000624096 1997 ntBASIC14.78□□□□□ -0.04
SOX2P48431 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 AC068418.2-201ENST00000577309 3703 ntBASIC14.78□□□□□ -0.04
SOX2P48431 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.78□□□□□ -0.04
SOX2P48431 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SOX2P48431 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SOX2P48431 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SOX2P48431 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SOX2P48431 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.77□□□□□ -0.04
SOX2P48431 AL365203.3-201ENST00000609742 2057 ntBASIC14.77□□□□□ -0.04
SOX2P48431 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.77□□□□□ -0.04
SOX2P48431 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SOX2P48431 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SOX2P48431 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.77□□□□□ -0.04
SOX2P48431 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 AC211429.1-201ENST00000415277 523 ntBASIC14.77□□□□□ -0.05
SOX2P48431 BX276092.5-203ENST00000456199 560 ntBASIC14.77□□□□□ -0.05
SOX2P48431 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SOX2P48431 AC096582.2-201ENST00000510860 516 ntBASIC14.77□□□□□ -0.05
SOX2P48431 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.77□□□□□ -0.05
SOX2P48431 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.77□□□□□ -0.05
SOX2P48431 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.77□□□□□ -0.05
SOX2P48431 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.77□□□□□ -0.05
SOX2P48431 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SOX2P48431 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.77□□□□□ -0.05
SOX2P48431 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.77□□□□□ -0.05
SOX2P48431 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.77□□□□□ -0.05
SOX2P48431 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SOX2P48431 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.77□□□□□ -0.05
SOX2P48431 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.77□□□□□ -0.05
SOX2P48431 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.77□□□□□ -0.05
SOX2P48431 LINC00895-201ENST00000629028 1637 ntBASIC14.77□□□□□ -0.05
SOX2P48431 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SOX2P48431 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
SOX2P48431 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SOX2P48431 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SOX2P48431 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SOX2P48431 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SOX2P48431 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 AL020989.1-201ENST00000422979 469 ntBASIC14.76□□□□□ -0.05
SOX2P48431 ACTG1P4-201ENST00000425123 1122 ntBASIC14.76□□□□□ -0.05
SOX2P48431 CHCHD2P8-201ENST00000429873 447 ntBASIC14.76□□□□□ -0.05
SOX2P48431 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.76□□□□□ -0.05
SOX2P48431 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.76□□□□□ -0.05
SOX2P48431 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms