Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF4P48230 AC010328.2-201ENST00000597698 1111 ntBASIC18.75■□□□□ 0.59
TM4SF4P48230 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF4P48230 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.75■□□□□ 0.59
TM4SF4P48230 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF4P48230 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF4P48230 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF4P48230 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.74■□□□□ 0.59
TM4SF4P48230 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TM4SF4P48230 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.74■□□□□ 0.59
TM4SF4P48230 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.74■□□□□ 0.59
TM4SF4P48230 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TM4SF4P48230 YBX1P6-201ENST00000442962 1002 ntBASIC18.74■□□□□ 0.59
TM4SF4P48230 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.74■□□□□ 0.59
TM4SF4P48230 ENPP7P5-201ENST00000541031 1031 ntBASIC18.74■□□□□ 0.59
TM4SF4P48230 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF4P48230 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.74■□□□□ 0.59
TM4SF4P48230 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
TM4SF4P48230 Z97205.2-201ENST00000564697 1639 ntBASIC18.74■□□□□ 0.59
TM4SF4P48230 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TM4SF4P48230 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.73■□□□□ 0.59
TM4SF4P48230 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 AC006033.1-201ENST00000440505 426 ntBASIC18.73■□□□□ 0.59
TM4SF4P48230 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.73■□□□□ 0.59
TM4SF4P48230 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 PTP4A1P2-201ENST00000546033 454 ntBASIC18.73■□□□□ 0.59
TM4SF4P48230 AC079316.1-201ENST00000548397 411 ntBASIC18.73■□□□□ 0.59
TM4SF4P48230 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.73■□□□□ 0.59
TM4SF4P48230 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 AC036164.1-201ENST00000570544 333 ntBASIC18.73■□□□□ 0.59
TM4SF4P48230 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TM4SF4P48230 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TM4SF4P48230 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF4P48230 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 AC006538.1-201ENST00000567905 1585 ntBASIC18.72■□□□□ 0.59
TM4SF4P48230 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.72■□□□□ 0.59
TM4SF4P48230 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF4P48230 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TM4SF4P48230 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF4P48230 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms