Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3AP46098 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.49■□□□□ 0.07
HTR3AP46098 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3AP46098 MIR1199-201ENST00000621445 119 ntBASIC15.49■□□□□ 0.07
HTR3AP46098 PGM5P2-202ENST00000637225 1043 ntBASIC15.49■□□□□ 0.07
HTR3AP46098 AL805961.1-202ENST00000641562 540 ntBASIC15.49■□□□□ 0.07
HTR3AP46098 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
HTR3AP46098 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3AP46098 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3AP46098 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3AP46098 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HTR3AP46098 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.48■□□□□ 0.07
HTR3AP46098 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 AC104640.1-201ENST00000562617 2109 ntBASIC15.48■□□□□ 0.07
HTR3AP46098 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.48■□□□□ 0.07
HTR3AP46098 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HTR3AP46098 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HTR3AP46098 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.48■□□□□ 0.07
HTR3AP46098 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 AC092068.3-201ENST00000587894 2016 ntBASIC15.48■□□□□ 0.07
HTR3AP46098 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3AP46098 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3AP46098 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HTR3AP46098 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3AP46098 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3AP46098 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3AP46098 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3AP46098 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms