Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX2-1P43699 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX2-1P43699 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.75□□□□□ -0.21
NKX2-1P43699 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NKX2-1P43699 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NKX2-1P43699 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 AL353593.2-201ENST00000602529 1483 ntBASIC13.75□□□□□ -0.21
NKX2-1P43699 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 AL603832.2-201ENST00000566195 2125 ntBASIC13.75□□□□□ -0.21
NKX2-1P43699 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NKX2-1P43699 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
NKX2-1P43699 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 FAM220CP-201ENST00000395253 831 ntBASIC13.75□□□□□ -0.21
NKX2-1P43699 AC087499.1-201ENST00000418141 1075 ntBASIC13.75□□□□□ -0.21
NKX2-1P43699 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.75□□□□□ -0.21
NKX2-1P43699 AC005332.3-201ENST00000589904 676 ntBASIC13.75□□□□□ -0.21
NKX2-1P43699 AL031432.5-201ENST00000641059 760 ntBASIC13.75□□□□□ -0.21
NKX2-1P43699 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.75□□□□□ -0.21
NKX2-1P43699 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NKX2-1P43699 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.75□□□□□ -0.21
NKX2-1P43699 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NKX2-1P43699 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
NKX2-1P43699 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NKX2-1P43699 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-1P43699 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-1P43699 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-1P43699 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 AC003669.1-201ENST00000334569 611 ntBASIC13.74□□□□□ -0.21
NKX2-1P43699 SPDYE15P-201ENST00000424157 909 ntBASIC13.74□□□□□ -0.21
NKX2-1P43699 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.74□□□□□ -0.21
NKX2-1P43699 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX2-1P43699 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-1P43699 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.74□□□□□ -0.21
NKX2-1P43699 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NKX2-1P43699 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.74□□□□□ -0.21
NKX2-1P43699 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.74□□□□□ -0.21
NKX2-1P43699 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.74□□□□□ -0.21
NKX2-1P43699 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NKX2-1P43699 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms