Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PBX3P40426 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PBX3P40426 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PBX3P40426 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.75■□□□□ 0.43
PBX3P40426 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
PBX3P40426 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.74■□□□□ 0.43
PBX3P40426 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.74■□□□□ 0.43
PBX3P40426 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 SPDYE22P-201ENST00000582158 798 ntBASIC17.74■□□□□ 0.43
PBX3P40426 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.74■□□□□ 0.43
PBX3P40426 AC004233.3-201ENST00000607794 1269 ntBASIC17.74■□□□□ 0.43
PBX3P40426 AC009118.2-201ENST00000613275 655 ntBASIC17.74■□□□□ 0.43
PBX3P40426 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.74■□□□□ 0.43
PBX3P40426 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
PBX3P40426 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PBX3P40426 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PBX3P40426 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.73■□□□□ 0.43
PBX3P40426 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
PBX3P40426 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.73■□□□□ 0.43
PBX3P40426 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PBX3P40426 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.73■□□□□ 0.43
PBX3P40426 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PBX3P40426 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.73■□□□□ 0.43
PBX3P40426 PIN1P1-201ENST00000412108 996 ntBASIC17.73■□□□□ 0.43
PBX3P40426 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.73■□□□□ 0.43
PBX3P40426 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.73■□□□□ 0.43
PBX3P40426 SPTLC1P1-201ENST00000447199 261 ntBASIC17.73■□□□□ 0.43
PBX3P40426 HLA-V-204ENST00000476601 1289 ntBASIC17.73■□□□□ 0.43
PBX3P40426 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.73■□□□□ 0.43
PBX3P40426 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.73■□□□□ 0.43
PBX3P40426 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PBX3P40426 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.73■□□□□ 0.43
PBX3P40426 AC008738.7-201ENST00000609744 511 ntBASIC17.73■□□□□ 0.43
PBX3P40426 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.73■□□□□ 0.43
PBX3P40426 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.73■□□□□ 0.43
PBX3P40426 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PBX3P40426 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.73■□□□□ 0.43
PBX3P40426 SNX33P1-201ENST00000592116 1762 ntBASIC17.73■□□□□ 0.43
PBX3P40426 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.73■□□□□ 0.43
PBX3P40426 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PBX3P40426 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.72■□□□□ 0.43
PBX3P40426 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
PBX3P40426 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PBX3P40426 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.72■□□□□ 0.43
PBX3P40426 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.72■□□□□ 0.43
PBX3P40426 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PBX3P40426 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PBX3P40426 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.72■□□□□ 0.43
PBX3P40426 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PBX3P40426 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PBX3P40426 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PBX3P40426 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PBX3P40426 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PBX3P40426 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms