Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.95■□□□□ 0.3
RPA3P35244 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.95■□□□□ 0.3
RPA3P35244 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.95■□□□□ 0.3
RPA3P35244 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RPA3P35244 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPA3P35244 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.94■□□□□ 0.3
RPA3P35244 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.94■□□□□ 0.3
RPA3P35244 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.94■□□□□ 0.3
RPA3P35244 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RPA3P35244 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.94■□□□□ 0.3
RPA3P35244 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.94■□□□□ 0.3
RPA3P35244 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.94■□□□□ 0.3
RPA3P35244 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.94■□□□□ 0.3
RPA3P35244 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RPA3P35244 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RPA3P35244 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RPA3P35244 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
RPA3P35244 AC092384.3-202ENST00000564646 2873 ntBASIC16.94■□□□□ 0.3
RPA3P35244 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPA3P35244 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.93■□□□□ 0.3
RPA3P35244 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.93■□□□□ 0.3
RPA3P35244 TSPY26P-202ENST00000565928 3884 ntBASIC16.93■□□□□ 0.3
RPA3P35244 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPA3P35244 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RPA3P35244 AC003669.1-201ENST00000334569 611 ntBASIC16.93■□□□□ 0.3
RPA3P35244 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.93■□□□□ 0.3
RPA3P35244 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.93■□□□□ 0.3
RPA3P35244 KLF4P1-201ENST00000412782 1185 ntBASIC16.93■□□□□ 0.3
RPA3P35244 HLA-J-202ENST00000469281 1241 ntBASIC16.93■□□□□ 0.3
RPA3P35244 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.93■□□□□ 0.3
RPA3P35244 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.93■□□□□ 0.3
RPA3P35244 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RPA3P35244 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPA3P35244 FER1L4-210ENST00000615531 5998 ntBASIC16.93■□□□□ 0.3
RPA3P35244 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
RPA3P35244 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPA3P35244 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
RPA3P35244 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPA3P35244 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
RPA3P35244 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.92■□□□□ 0.3
RPA3P35244 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms