Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HTR1EP28566 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR1EP28566 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR1EP28566 AL355877.3-201ENST00000622820 899 ntBASIC16.06■□□□□ 0.16
HTR1EP28566 AC116407.3-201ENST00000623905 1129 ntBASIC16.06■□□□□ 0.16
HTR1EP28566 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.06■□□□□ 0.16
HTR1EP28566 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HTR1EP28566 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.05■□□□□ 0.16
HTR1EP28566 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.05■□□□□ 0.16
HTR1EP28566 AC003669.1-201ENST00000334569 611 ntBASIC16.05■□□□□ 0.16
HTR1EP28566 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.05■□□□□ 0.16
HTR1EP28566 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.05■□□□□ 0.16
HTR1EP28566 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.05■□□□□ 0.16
HTR1EP28566 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 DUX4L17-201ENST00000557360 1267 ntBASIC16.05■□□□□ 0.16
HTR1EP28566 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HTR1EP28566 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 AC103702.1-201ENST00000548801 2630 ntBASIC16.05■□□□□ 0.16
HTR1EP28566 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.05■□□□□ 0.16
HTR1EP28566 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.05■□□□□ 0.16
HTR1EP28566 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.05■□□□□ 0.16
HTR1EP28566 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.05■□□□□ 0.16
HTR1EP28566 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HTR1EP28566 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HTR1EP28566 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HTR1EP28566 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HTR1EP28566 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HTR1EP28566 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.04■□□□□ 0.16
HTR1EP28566 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.04■□□□□ 0.16
HTR1EP28566 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HTR1EP28566 AC005336.2-201ENST00000593183 939 ntBASIC16.04■□□□□ 0.16
HTR1EP28566 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 MTDHP3-201ENST00000594186 672 ntBASIC16.04■□□□□ 0.16
HTR1EP28566 AL139424.1-201ENST00000607572 797 ntBASIC16.04■□□□□ 0.16
HTR1EP28566 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.04■□□□□ 0.16
HTR1EP28566 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HTR1EP28566 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HTR1EP28566 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.03■□□□□ 0.16
HTR1EP28566 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HTR1EP28566 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms