Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 AC092171.3-201ENST00000610122 2651 ntBASIC12.53□□□□□ -0.4
SMIM17P0DL12 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.52□□□□□ -0.4
SMIM17P0DL12 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.52□□□□□ -0.4
SMIM17P0DL12 RNF216P1-203ENST00000404404 2427 ntBASIC12.52□□□□□ -0.4
SMIM17P0DL12 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.52□□□□□ -0.4
SMIM17P0DL12 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
SMIM17P0DL12 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
SMIM17P0DL12 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.52□□□□□ -0.4
SMIM17P0DL12 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 PAUPAR-201ENST00000630360 2965 ntBASIC12.52□□□□□ -0.4
SMIM17P0DL12 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SMIM17P0DL12 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 AL359075.1-203ENST00000462729 1002 ntBASIC12.52□□□□□ -0.41
SMIM17P0DL12 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 AC109462.3-201ENST00000573934 613 ntBASIC12.52□□□□□ -0.41
SMIM17P0DL12 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 AL023973.1-201ENST00000624619 620 ntBASIC12.52□□□□□ -0.41
SMIM17P0DL12 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 AC097374.2-201ENST00000618617 1306 ntBASIC12.52□□□□□ -0.41
SMIM17P0DL12 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.52□□□□□ -0.41
SMIM17P0DL12 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SMIM17P0DL12 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.52□□□□□ -0.41
SMIM17P0DL12 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 AC068472.1-201ENST00000474589 881 ntBASIC12.51□□□□□ -0.41
SMIM17P0DL12 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.51□□□□□ -0.41
SMIM17P0DL12 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SMIM17P0DL12 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms