Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.24■□□□□ 0.19
LINGO3P0C6S8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 BX276092.7-203ENST00000637198 1536 ntBASIC16.24■□□□□ 0.19
LINGO3P0C6S8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINGO3P0C6S8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 KRT18P1-202ENST00000452408 1331 ntBASIC16.23■□□□□ 0.19
LINGO3P0C6S8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 AC139749.1-202ENST00000617529 3139 ntBASIC16.23■□□□□ 0.19
LINGO3P0C6S8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 TPSP2-201ENST00000561760 610 ntBASIC16.23■□□□□ 0.19
LINGO3P0C6S8 MIR3180-1-201ENST00000580374 94 ntBASIC16.23■□□□□ 0.19
LINGO3P0C6S8 MIR3180-3-201ENST00000584616 94 ntBASIC16.23■□□□□ 0.19
LINGO3P0C6S8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 LINC01451-201ENST00000623792 534 ntBASIC16.23■□□□□ 0.19
LINGO3P0C6S8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LINGO3P0C6S8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 AC246785.2-201ENST00000432512 513 ntBASIC16.22■□□□□ 0.19
LINGO3P0C6S8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 AC011840.4-201ENST00000578471 627 ntBASIC16.22■□□□□ 0.19
LINGO3P0C6S8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
LINGO3P0C6S8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms