Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 BCRP1-201ENST00000444246 691 ntBASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 AC051619.7-201ENST00000568314 623 ntBASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 AC022211.2-201ENST00000585075 2527 ntBASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB40ALP0C0E4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 SPDYE7P-202ENST00000420373 878 ntBASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 RNA5SP421-201ENST00000516864 134 ntBASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC005498.2-205ENST00000593218 784 ntBASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC021097.1-201ENST00000607902 574 ntBASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC011676.5-201ENST00000624864 2660 ntBASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB40ALP0C0E4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40ALP0C0E4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms