Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC027601.4-201ENST00000611259 610 ntBASIC13.19□□□□□ -0.3
TRGV3P03979 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV3P03979 REXO1L3P-201ENST00000622202 1288 ntBASIC13.19□□□□□ -0.3
TRGV3P03979 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.19□□□□□ -0.3
TRGV3P03979 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRGV3P03979 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV3P03979 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRGV3P03979 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 AL353732.1-201ENST00000569618 1459 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRGV3P03979 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 MIR940-201ENST00000401276 94 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 AL591424.1-201ENST00000442569 1213 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 AL513480.1-201ENST00000451731 511 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRGV3P03979 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.18□□□□□ -0.3
TRGV3P03979 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 RNA5SP416-201ENST00000516838 111 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 AC107918.2-201ENST00000530817 355 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV3P03979 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 OR7E47P-204ENST00000575924 449 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 AC091167.2-201ENST00000579581 588 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 AC005412.3-201ENST00000580309 715 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.18□□□□□ -0.3
TRGV3P03979 AP001350.2-201ENST00000625104 1094 ntBASIC13.18□□□□□ -0.3
TRGV3P03979 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.18□□□□□ -0.3
TRGV3P03979 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV3P03979 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV3P03979 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV3P03979 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV3P03979 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.17□□□□□ -0.3
TRGV3P03979 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV3P03979 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
TRGV3P03979 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.17□□□□□ -0.3
TRGV3P03979 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRGV3P03979 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV3P03979 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRGV3P03979 HCG4B-203ENST00000450128 991 ntBASIC13.17□□□□□ -0.3
TRGV3P03979 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.17□□□□□ -0.3
TRGV3P03979 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.17□□□□□ -0.3
TRGV3P03979 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRGV3P03979 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms