Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCA1O95477 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
ABCA1O95477 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCA1O95477 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCA1O95477 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 MIR943-201ENST00000401286 94 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 AC004890.2-204ENST00000481968 304 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 SLC25A6P2-201ENST00000497974 877 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 CR383656.12-201ENST00000549567 513 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 GNAS-203ENST00000306120 1878 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 CROCCP2-202ENST00000412962 2773 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 AC125807.1-201ENST00000483097 614 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ABCA1O95477 TUBB3P1-201ENST00000405796 1332 ntBASIC14.04□□□□□ -0.16
ABCA1O95477 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ABCA1O95477 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.04□□□□□ -0.16
ABCA1O95477 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCA1O95477 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ABCA1O95477 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 SLC25A6P5-201ENST00000435663 894 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 AC002558.1-201ENST00000488906 803 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 AC026150.2-201ENST00000564693 1156 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.03□□□□□ -0.16
ABCA1O95477 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 OR8S1-201ENST00000310194 1080 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 SPDYE7P-202ENST00000420373 878 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCA1O95477 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 AC107918.2-201ENST00000530817 355 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCA1O95477 AP000842.3-202ENST00000569238 1080 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 AC026120.1-201ENST00000611536 926 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ABCA1O95477 MIR6752-201ENST00000618442 71 ntBASIC14.03□□□□□ -0.16
ABCA1O95477 AL645728.2-201ENST00000641974 660 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms