Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.83■□□□□ 0.28
VAPBO95292 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.83■□□□□ 0.28
VAPBO95292 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.83■□□□□ 0.28
VAPBO95292 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.83■□□□□ 0.28
VAPBO95292 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.83■□□□□ 0.28
VAPBO95292 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VAPBO95292 KRT18P67-201ENST00000432816 1264 ntBASIC16.83■□□□□ 0.28
VAPBO95292 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.83■□□□□ 0.28
VAPBO95292 AC107918.2-201ENST00000530817 355 ntBASIC16.83■□□□□ 0.28
VAPBO95292 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 AC012640.2-201ENST00000561606 901 ntBASIC16.83■□□□□ 0.28
VAPBO95292 AC091167.2-201ENST00000579581 588 ntBASIC16.83■□□□□ 0.28
VAPBO95292 AP002414.3-201ENST00000589352 1468 ntBASIC16.83■□□□□ 0.28
VAPBO95292 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.83■□□□□ 0.28
VAPBO95292 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.83■□□□□ 0.28
VAPBO95292 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.83■□□□□ 0.28
VAPBO95292 AL356488.2-201ENST00000602755 427 ntBASIC16.83■□□□□ 0.28
VAPBO95292 AC008667.4-201ENST00000607370 168 ntBASIC16.83■□□□□ 0.28
VAPBO95292 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.83■□□□□ 0.28
VAPBO95292 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.83■□□□□ 0.28
VAPBO95292 AC131009.4-201ENST00000624048 1740 ntBASIC16.83■□□□□ 0.28
VAPBO95292 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.83■□□□□ 0.28
VAPBO95292 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.83■□□□□ 0.28
VAPBO95292 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VAPBO95292 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VAPBO95292 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VAPBO95292 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 SLC22A20-204ENST00000530038 1673 ntBASIC16.82■□□□□ 0.28
VAPBO95292 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPBO95292 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
VAPBO95292 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VAPBO95292 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 PMS2P1-201ENST00000431037 1228 ntBASIC16.82■□□□□ 0.28
VAPBO95292 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.82■□□□□ 0.28
VAPBO95292 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 AC079781.3-201ENST00000449110 356 ntBASIC16.82■□□□□ 0.28
VAPBO95292 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPBO95292 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPBO95292 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.82■□□□□ 0.28
VAPBO95292 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VAPBO95292 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.82■□□□□ 0.28
VAPBO95292 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.82■□□□□ 0.28
VAPBO95292 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
VAPBO95292 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
VAPBO95292 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VAPBO95292 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VAPBO95292 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VAPBO95292 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VAPBO95292 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VAPBO95292 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.81■□□□□ 0.28
VAPBO95292 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.81■□□□□ 0.28
VAPBO95292 ME2P1-201ENST00000426028 1970 ntBASIC16.81■□□□□ 0.28
VAPBO95292 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.81■□□□□ 0.28
VAPBO95292 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.81■□□□□ 0.28
VAPBO95292 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.81■□□□□ 0.28
VAPBO95292 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.81■□□□□ 0.28
VAPBO95292 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.81■□□□□ 0.28
VAPBO95292 AL512652.2-201ENST00000625156 1716 ntBASIC16.81■□□□□ 0.28
VAPBO95292 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
VAPBO95292 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VAPBO95292 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.81■□□□□ 0.28
VAPBO95292 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms