Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD4O95243 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD4O95243 TSEN15P1-201ENST00000423257 515 ntBASIC19.89■□□□□ 0.77
MBD4O95243 PMS2P2-201ENST00000425039 1128 ntBASIC19.89■□□□□ 0.77
MBD4O95243 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD4O95243 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD4O95243 IGHV3-62-201ENST00000520057 340 ntBASIC19.89■□□□□ 0.77
MBD4O95243 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD4O95243 AC006538.1-201ENST00000567905 1585 ntBASIC19.89■□□□□ 0.77
MBD4O95243 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD4O95243 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.89■□□□□ 0.77
MBD4O95243 AC027307.2-201ENST00000591252 911 ntBASIC19.89■□□□□ 0.77
MBD4O95243 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD4O95243 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD4O95243 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD4O95243 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MBD4O95243 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 HLA-A-202ENST00000376806 1854 ntBASIC19.88■□□□□ 0.77
MBD4O95243 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD4O95243 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.88■□□□□ 0.77
MBD4O95243 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.88■□□□□ 0.77
MBD4O95243 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.88■□□□□ 0.77
MBD4O95243 AC009093.7-201ENST00000623853 1223 ntBASIC19.88■□□□□ 0.77
MBD4O95243 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD4O95243 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MBD4O95243 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MBD4O95243 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD4O95243 GGT4P-201ENST00000623672 1708 ntBASIC19.88■□□□□ 0.77
MBD4O95243 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 UXT-AS1-201ENST00000590504 1525 ntBASIC19.87■□□□□ 0.77
MBD4O95243 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD4O95243 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.87■□□□□ 0.77
MBD4O95243 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD4O95243 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
MBD4O95243 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.87■□□□□ 0.77
MBD4O95243 KRT18P32-201ENST00000424695 1287 ntBASIC19.87■□□□□ 0.77
MBD4O95243 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD4O95243 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 AC008267.7-201ENST00000624570 1194 ntBASIC19.87■□□□□ 0.77
MBD4O95243 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 LTB4R2-202ENST00000528054 3092 ntBASIC19.87■□□□□ 0.77
MBD4O95243 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
MBD4O95243 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD4O95243 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD4O95243 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD4O95243 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD4O95243 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD4O95243 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.86■□□□□ 0.77
MBD4O95243 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.86■□□□□ 0.77
MBD4O95243 HLA-J-202ENST00000469281 1241 ntBASIC19.86■□□□□ 0.77
MBD4O95243 AC109322.1-201ENST00000524499 1264 ntBASIC19.86■□□□□ 0.77
MBD4O95243 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.86■□□□□ 0.77
MBD4O95243 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
MBD4O95243 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.86■□□□□ 0.77
MBD4O95243 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.86■□□□□ 0.77
MBD4O95243 AC093028.1-201ENST00000622998 982 ntBASIC19.86■□□□□ 0.77
MBD4O95243 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
MBD4O95243 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD4O95243 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD4O95243 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms