Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AF228730.7-201ENST00000641842 219 ntBASIC16.98■□□□□ 0.31
USP1O94782 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
USP1O94782 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.98■□□□□ 0.31
USP1O94782 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
USP1O94782 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
USP1O94782 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 AC092850.2-201ENST00000623821 2697 ntBASIC16.97■□□□□ 0.31
USP1O94782 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 AC026396.1-201ENST00000419388 421 ntBASIC16.97■□□□□ 0.31
USP1O94782 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.97■□□□□ 0.31
USP1O94782 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 ALOX12P2-203ENST00000570921 1945 ntBASIC16.97■□□□□ 0.31
USP1O94782 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
USP1O94782 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
USP1O94782 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
USP1O94782 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.96■□□□□ 0.31
USP1O94782 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
USP1O94782 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 AC004870.1-201ENST00000315132 882 ntBASIC16.96■□□□□ 0.31
USP1O94782 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.96■□□□□ 0.31
USP1O94782 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.96■□□□□ 0.31
USP1O94782 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.96■□□□□ 0.31
USP1O94782 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.96■□□□□ 0.31
USP1O94782 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP1O94782 AL662844.4-201ENST00000606367 2838 ntBASIC16.96■□□□□ 0.3
USP1O94782 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP1O94782 AC007950.2-201ENST00000615045 2347 ntBASIC16.96■□□□□ 0.3
USP1O94782 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP1O94782 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.96■□□□□ 0.3
USP1O94782 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP1O94782 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
USP1O94782 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
USP1O94782 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP1O94782 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP1O94782 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP1O94782 ME2P1-201ENST00000426028 1970 ntBASIC16.95■□□□□ 0.3
USP1O94782 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP1O94782 NFIC-211ENST00000641145 8399 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms