Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CLDN11O75508 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN11O75508 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN11O75508 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN11O75508 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN11O75508 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN11O75508 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN11O75508 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN11O75508 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN11O75508 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN11O75508 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN11O75508 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN11O75508 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 AC106886.4-201ENST00000623557 2502 ntBASIC17.03■□□□□ 0.32
CLDN11O75508 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN11O75508 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN11O75508 AL592309.1-201ENST00000443127 649 ntBASIC17.03■□□□□ 0.32
CLDN11O75508 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN11O75508 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN11O75508 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN11O75508 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 AC020765.3-201ENST00000613051 740 ntBASIC17.03■□□□□ 0.32
CLDN11O75508 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN11O75508 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN11O75508 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CLDN11O75508 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
CLDN11O75508 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 AL031731.1-201ENST00000642131 2094 ntBASIC17.03■□□□□ 0.32
CLDN11O75508 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN11O75508 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN11O75508 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLDN11O75508 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN11O75508 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN11O75508 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 SPCS2P4-201ENST00000436160 681 ntBASIC17.02■□□□□ 0.32
CLDN11O75508 IGHV3-62-201ENST00000520057 340 ntBASIC17.02■□□□□ 0.32
CLDN11O75508 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN11O75508 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLDN11O75508 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN11O75508 KRT8P23-201ENST00000560090 1207 ntBASIC17.02■□□□□ 0.32
CLDN11O75508 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.02■□□□□ 0.32
CLDN11O75508 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN11O75508 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.02■□□□□ 0.32
CLDN11O75508 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN11O75508 AC008267.7-201ENST00000624570 1194 ntBASIC17.02■□□□□ 0.32
CLDN11O75508 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN11O75508 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN11O75508 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN11O75508 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN11O75508 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
CLDN11O75508 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN11O75508 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
CLDN11O75508 GPAA1P2-202ENST00000606848 1787 ntBASIC17.02■□□□□ 0.31
CLDN11O75508 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN11O75508 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN11O75508 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN11O75508 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
CLDN11O75508 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CLDN11O75508 AD000864.1-201ENST00000624076 2295 ntBASIC17.01■□□□□ 0.31
CLDN11O75508 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN11O75508 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.01■□□□□ 0.31
CLDN11O75508 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN11O75508 HLA-A-202ENST00000376806 1854 ntBASIC17.01■□□□□ 0.31
CLDN11O75508 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN11O75508 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN11O75508 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN11O75508 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN11O75508 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms