Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 MMP23A-201ENST00000234610 1017 ntBASIC13.7□□□□□ -0.22
SSSCA1O60232 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.7□□□□□ -0.22
SSSCA1O60232 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.7□□□□□ -0.22
SSSCA1O60232 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 AL603832.2-201ENST00000566195 2125 ntBASIC13.7□□□□□ -0.22
SSSCA1O60232 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.7□□□□□ -0.22
SSSCA1O60232 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.7□□□□□ -0.22
SSSCA1O60232 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.7□□□□□ -0.22
SSSCA1O60232 AL021920.2-201ENST00000624828 1351 ntBASIC13.7□□□□□ -0.22
SSSCA1O60232 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.7□□□□□ -0.22
SSSCA1O60232 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSSCA1O60232 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SSSCA1O60232 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.69□□□□□ -0.22
SSSCA1O60232 AL136379.1-201ENST00000623471 2642 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SSSCA1O60232 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SSSCA1O60232 LINC00895-201ENST00000629028 1637 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SSSCA1O60232 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSSCA1O60232 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSSCA1O60232 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 MIR662-201ENST00000384847 95 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SSSCA1O60232 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
SSSCA1O60232 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 AL441883.1-201ENST00000566170 1045 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.69□□□□□ -0.22
SSSCA1O60232 AL390719.2-201ENST00000606993 987 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 AL138966.2-201ENST00000621997 464 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.69□□□□□ -0.22
SSSCA1O60232 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SSSCA1O60232 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.69□□□□□ -0.22
SSSCA1O60232 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.69□□□□□ -0.22
SSSCA1O60232 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.69□□□□□ -0.22
SSSCA1O60232 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSSCA1O60232 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms