Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM1O00151 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.99■□□□□ 0.15
PDLIM1O00151 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 AL121672.3-201ENST00000608644 468 ntBASIC15.99■□□□□ 0.15
PDLIM1O00151 AC069148.1-201ENST00000608741 768 ntBASIC15.99■□□□□ 0.15
PDLIM1O00151 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM1O00151 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.99■□□□□ 0.15
PDLIM1O00151 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM1O00151 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDLIM1O00151 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM1O00151 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.99■□□□□ 0.15
PDLIM1O00151 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PDLIM1O00151 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM1O00151 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.98■□□□□ 0.15
PDLIM1O00151 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 TSPY12P-201ENST00000421279 868 ntBASIC15.98■□□□□ 0.15
PDLIM1O00151 ATP5G2P1-201ENST00000433580 426 ntBASIC15.98■□□□□ 0.15
PDLIM1O00151 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.98■□□□□ 0.15
PDLIM1O00151 BX276092.5-203ENST00000456199 560 ntBASIC15.98■□□□□ 0.15
PDLIM1O00151 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.98■□□□□ 0.15
PDLIM1O00151 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.98■□□□□ 0.15
PDLIM1O00151 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.98■□□□□ 0.15
PDLIM1O00151 NPAP1P7-201ENST00000613027 823 ntBASIC15.98■□□□□ 0.15
PDLIM1O00151 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM1O00151 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.98■□□□□ 0.15
PDLIM1O00151 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 AL353692.3-201ENST00000407031 1396 ntBASIC15.98■□□□□ 0.15
PDLIM1O00151 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM1O00151 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.98■□□□□ 0.15
PDLIM1O00151 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PDLIM1O00151 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM1O00151 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM1O00151 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms