Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 RCN1P2-201ENST00000398357 915 ntBASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC114341.1-201ENST00000618070 349 ntBASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF103-CHMP3A0A140T963 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AL356309.3-201ENST00000624132 1934 ntBASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 IGHV3-47-201ENST00000425060 335 ntBASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC104819.1-201ENST00000504587 486 ntBASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AP000867.3-201ENST00000524675 377 ntBASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 AC069148.1-201ENST00000608741 768 ntBASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF103-CHMP3A0A140T963 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF103-CHMP3A0A140T963 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms