Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHA3Q9Y5H8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 UPK3BP1-201ENST00000428678 509 ntBASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 AC091304.2-201ENST00000564639 760 ntBASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA3Q9Y5H8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 ELK2BP-201ENST00000415014 1224 ntBASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 AC107918.2-201ENST00000530817 355 ntBASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 AC021087.4-201ENST00000563761 564 ntBASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 CYP2A7P1-201ENST00000595391 815 ntBASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHA3Q9Y5H8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 AKR1C7P-201ENST00000305623 895 ntBASIC17.47■□□□□ 0.39
PCDHA3Q9Y5H8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms