Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERGIC3Q9Y282 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 HMGA1P5-201ENST00000412453 271 ntBASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC111152.3-201ENST00000569699 673 ntBASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ERGIC3Q9Y282 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 MIR4785-201ENST00000585005 73 ntBASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERGIC3Q9Y282 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms