Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AL121761.2-201ENST00000598007 1648 ntBASIC14.67□□□□□ -0.06
CDH20Q9HBT6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 MIR940-201ENST00000401276 94 ntBASIC14.67□□□□□ -0.06
CDH20Q9HBT6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AL591424.1-201ENST00000442569 1213 ntBASIC14.67□□□□□ -0.06
CDH20Q9HBT6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AC091167.2-201ENST00000579581 588 ntBASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AC064836.3-201ENST00000607928 673 ntBASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDH20Q9HBT6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 HCG4B-203ENST00000450128 991 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 KRT18P58-201ENST00000527480 1120 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 DUX4L17-201ENST00000557360 1267 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 AC140113.2-201ENST00000604370 208 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 REXO1L3P-201ENST00000622202 1288 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 AP001350.2-201ENST00000625104 1094 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH20Q9HBT6 AD000864.1-201ENST00000624076 2295 ntBASIC14.66□□□□□ -0.06
CDH20Q9HBT6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 AL353732.1-201ENST00000569618 1459 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 KRT18P3-201ENST00000451602 1288 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 AL513480.1-201ENST00000451731 511 ntBASIC14.65□□□□□ -0.06
CDH20Q9HBT6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH20Q9HBT6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms