Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 RN7SL204P-201ENST00000582831 262 ntBASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 AL606495.2-201ENST00000605867 535 ntBASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 AC004908.3-201ENST00000610248 625 ntBASIC25.12■■□□□ 1.61
SCAF1Q9H7N4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 VN2R19P-201ENST00000442399 1052 ntBASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 TSPY16P-201ENST00000449843 468 ntBASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 AL022326.1-202ENST00000641533 845 ntBASIC25.11■■□□□ 1.61
SCAF1Q9H7N4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 LYSMD4-203ENST00000378904 2122 ntBASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 ELK2BP-201ENST00000415014 1224 ntBASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 AP005018.1-201ENST00000525475 301 ntBASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 AL357033.4-201ENST00000617703 1807 ntBASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC25.1■■□□□ 1.61
SCAF1Q9H7N4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 PAUPAR-201ENST00000630360 2965 ntBASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCAF1Q9H7N4 DBET-201ENST00000630918 3363 ntBASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms