Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK3Q9H422 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK3Q9H422 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 ZNF890P-202ENST00000530367 1156 ntBASIC18.17■□□□□ 0.5
HIPK3Q9H422 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 AC008494.3-201ENST00000606615 944 ntBASIC18.17■□□□□ 0.5
HIPK3Q9H422 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK3Q9H422 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK3Q9H422 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIPK3Q9H422 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HIPK3Q9H422 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 SPDYE19P-201ENST00000338590 713 ntBASIC18.16■□□□□ 0.5
HIPK3Q9H422 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 MIR1909-201ENST00000411312 80 ntBASIC18.16■□□□□ 0.5
HIPK3Q9H422 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 SLC25A6P5-201ENST00000435663 894 ntBASIC18.16■□□□□ 0.5
HIPK3Q9H422 ACA64.2-201ENST00000459014 129 ntBASIC18.16■□□□□ 0.5
HIPK3Q9H422 RN7SL618P-201ENST00000477850 296 ntBASIC18.16■□□□□ 0.5
HIPK3Q9H422 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 DOC2GP-202ENST00000514950 1163 ntBASIC18.16■□□□□ 0.5
HIPK3Q9H422 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIPK3Q9H422 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HIPK3Q9H422 NOC2LP2-201ENST00000407594 1944 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 AC079776.1-201ENST00000401540 1152 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 RPS2P32-201ENST00000439199 892 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 AC093004.1-201ENST00000508850 424 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 WASH4P-201ENST00000564273 1246 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 CHCHD2P3-201ENST00000603038 451 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 MIR6805-201ENST00000615055 62 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.15■□□□□ 0.5
HIPK3Q9H422 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
HIPK3Q9H422 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HIPK3Q9H422 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIPK3Q9H422 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.5
HIPK3Q9H422 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIPK3Q9H422 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HIPK3Q9H422 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.14■□□□□ 0.5
HIPK3Q9H422 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms