Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 YBX2P1-201ENST00000394192 760 ntBASIC17.61■□□□□ 0.41
LHX5Q9H2C1 UPF3AP3-201ENST00000420996 769 ntBASIC17.61■□□□□ 0.41
LHX5Q9H2C1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 AL691403.2-201ENST00000618460 490 ntBASIC17.61■□□□□ 0.41
LHX5Q9H2C1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 LINC01144-201ENST00000626198 1710 ntBASIC17.61■□□□□ 0.41
LHX5Q9H2C1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX5Q9H2C1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 AC092474.2-201ENST00000424288 719 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 GPX1P2-201ENST00000429271 606 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 PDPK2P-202ENST00000562415 1191 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 AC002347.1-201ENST00000569543 541 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 MIR3687-2-201ENST00000577708 61 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 AL009183.1-201ENST00000603760 355 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 MIR3687-1-201ENST00000614492 61 ntBASIC17.6■□□□□ 0.41
LHX5Q9H2C1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX5Q9H2C1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LHX5Q9H2C1 AC023274.1-201ENST00000418278 595 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms